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- Sabal - Sabal
- Sabi grass - Urochloa mosambicensis
- Safflower - Carthamus tinctorius L.
- Sage, garden - Salvia officinalis
- Sagewort, Louisiana - Artemisia ludoviciana Nutt.
- Sagina subulata - Sagina subulata
- Sainfoin - Onobrychis viciifolia Scop.
- Salad burnett - Sanguasorbia minor
- Salix - Salix
- Salpiglossis - Salpiglossis
- Salsify - Tragopogon porrifolius
- Saltbush, fourwing - Atriplex canescens (Pursh) Nutt.
- Salvia - Salvia
- Samanea - Samanea
- Sambucus - Sambucus
- Sanguisorba - Sanguisorba
- Santalum - Santalum
- Santolina - Santolina
- Sanvitalia - Sanvitalia
- Sapindus - Sapindus
- Sapium - Sapium
- Saponaria - Saponaria
- Satureja - Satureja
- Savory, summer - Satureja hortensis
- Savory, winter - Satureja montana
- Scabiosa - Scabiosa
- Schefflera - Schefflera
- Schinus - Schinus
- Schizanthus - Schizanthus
- Schizolobium - Schizolobium
- Scorzonera - Scorzonera hispanica
- Sea purslane - Atriplex hortensis L.
- Sedum - Sedum
- Selenicereus - Selenicereus
- Senecio - Senecio
- Senna - Senna
- Sequoia - Sequoia
- Sequoiadendron - Sequoiadendron
- Serenoa - Serenoa
- Serradella - Ornithopus compressus
- Sesame - Sesamum indicum L.
- Sesbania - Sesbania exaltata (Raf.) A.W. Hill
- Sesbania - Sesbania
- Setaria - Setaria sphacelata (formerly anceps)
- Setaria - Setaria
- Shallot - Allium cepa aggregatum
- Shasta daisy - Leucanthemum x superbum
- Sicana - Sicana
- Sidalcea - Sidalcea
- Signalgrass - Brachiaria decumbens
- Silene - Silene
- Silphium - Silphium
- Simmondsia - Simmondsia
- Sinningia - Sinningia
- Siratro - Macroptilium atropurpureum
- Siro - Panicum laxum
- Sisyrinchium - Sisyrinchium
- Sloughgrass - Beckmannia syzigachne
- Smilax - Smilax
- Smilo - Piptatherum miliaceum (L.) Coss.
- Snapdragon - Antirrhinum spp.
- Solanum - Solanum
- Solidago - Solidago
- Sophora - Sophora
- Sorbaria - Sorbaria
- Sorbus - Sorbus
- Sorghum - Sorghum bicolor (L.) Moench
- Sorghum almum - Sorghum x almum L. Parodi
- Sorghum-sudangrass - Sorghum x drummondii (Steud.) Millsp. and Chase
- Sorgrass - Rhizomatous derivatives of a johnsongrass x sorghum cross or a johnsongrass x sudangrass cross
- Sorrel - Rumex acetosa
- Sourclover - Melilotus indicus (L.) All.
- Soybean - Glycine max (L.) Merr.
- Soybean, edible - Glycine max
- Soybean, edible - Glycine max
- Spartium - Spartium
- Spathodea - Spathodea
- Spearmint - Menta spicata viridis
- Spelt - Triticum spelta L.
- Sphaeralcea - Sphaeralcea
- Spilanthes - Spilanthes
- Spinach - Spinacea oleracea
- Spiraea - Spiraea
- Squash - Cucurbita spp.
- St. Augustine - Stenotophrum secundatum
- Stachys - Stachys
- Stapelia - Stapelia
- Statice - Statice
- Stenocactus - Stenocactus
- Stephanotis - Stephanotis
- Stetsonia - Stetsonia
- Stevia - Stevia
- Stewartia - Stewartia
- Stictocardia - Stictocardia
- Stipa - Stipa
- Stock - Stock
- Strelitzia - Strelitzia
- Strychnos - Strychnos
- Stylo - Stylosanthes spp.
- Stylo, amiga - Stylosanthes hamata
- Stylo, cook - Stylosanthes guianensis
- Stylo, siran - Stylosanthes scabra
- Styrax - Styrax
- Sudangrass - Sorghum x drummondii (Steud.) Millsp. and Chase
- Sugarbeet - Beta vulgaris L. subsp. vulgaris
- Sunflower - Helianthus annuus L.
- Swede - Brassica napus L. varnapobrassica
- Swede - Brassica napus napobrassica
- Sweet corn - Zea mays var. saccharata
- Sweet peas - Sweet peas
- Sweet vernalgrass - Anthoxanthum odoratum L.
- Sweet woodruff - Gallium odoratum
- Sweetclover - Melilotus soo.
- Sweetclover, white - Melilotus albus Medik.
- Sweetclover, yellow - Melilotus officinalis Lam.
- Sweetvetch, northern - Hedysarum boreale Nutt.
- Swietenia - Swietenia
- Swiss chard - Beta vulgaris cicla
- Switchgrass - Panicum virgatum L.
- Symphandra - Symphandra
- Symphoricarpos - Symphoricarpos
- Synsepalum - Synsepalum
- Syringa - Syringa
- Syzygium - Syzygium
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